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Understanding the Impact of Section 143(2) Scrutiny on Your Income Tax Filing and Reporting

  • Writer: Bhavika Rajput
    Bhavika Rajput
  • Jun 11
  • 11 min read

Section 143(2) of the Income Tax Act is one of the primary tools used by the Income Tax Department to examine discrepancies or suspicious entries in a taxpayer’s return. It empowers assessing officers to initiate scrutiny when the return appears inaccurate, incomplete, or inconsistent. While receiving such a notice may seem alarming, it's simply a step toward validation and compliance, not an accusation. The key lies in understanding its scope, triggers, and response requirements. Filing accurate returns, reporting all bank accounts, and matching income sources with official records significantly reduce the risk. Services like TaxBuddy are designed to support taxpayers in these areas, offering both automation and expert help to ensure error-free, confident tax filing.

Table of Contents

What Is Section 143(2) Scrutiny and Why Is It Issued?

Section 143(2) scrutiny is a formal assessment notice issued by the Income Tax Department after reviewing your filed Income Tax Return (ITR). It serves as a follow-up when the department finds potential inconsistencies, unusually high claims, or patterns that warrant further investigation. The primary objective is to verify:

  • Income declared is not understated

  • Deductions and exemptions are genuine

  • Transactions, especially high-value ones, are properly disclosed

  • Losses are not inflated to reduce taxable income

This is not a punitive action; rather, it's a compliance mechanism to ensure transparency and accuracy. Notices under this section are served only post-return filing and must be issued within three months from the end of the relevant financial year.


Key Triggers That Lead to a Section 143(2) Notice

Scrutiny under Section 143(2) isn't arbitrary. Each notice is backed by specific patterns or irregularities detected in your Income Tax Return (ITR). The Income Tax Department uses both manual reviews and data-driven systems to identify cases that require further examination. Understanding these triggers can help you file smarter and reduce the risk of being selected for scrutiny.


1. Mismatch in Income Details

Your ITR is cross-verified against third-party data sources like Form 26AS, AIS (Annual Information Statement), and TDS certificates. If the income declared in your return doesn’t match what’s reported by banks, employers, or investment platforms, it raises a red flag. For instance, if your bank reports ₹2,00,000 as interest income, but your ITR mentions only ₹50,000, the discrepancy may trigger a notice.


2. Deductions or Exemptions That Don’t Align with Your Income

Claiming unusually large deductions or tax exemptions—especially under Sections 80C, 80D, or HRA—without corresponding income levels can attract scrutiny. For example, a taxpayer earning ₹3,00,000 claiming a deduction of ₹2,00,000 under multiple sections may be asked to substantiate these claims with evidence. The department checks whether the deductions claimed are realistic and backed by eligible investments or expenses.


3. High-Value Transactions Not Properly Disclosed

Transactions involving substantial sums—such as the sale or purchase of real estate, mutual fund redemptions, or large deposits—are closely monitored. These are tracked through PAN-linked reporting by third parties. If these transactions are missing or incorrectly reported in your ITR, the system may flag your return for a deeper audit. For instance, selling a property worth ₹80 lakhs but not declaring capital gains can result in a notice.


4. Frequent Revisions in Filed Returns

Revising your return multiple times, especially if adjustments involve major changes in income, deductions, or tax liability, may draw attention. While the law permits revisions, doing so repeatedly without strong justification can be seen as an attempt to manipulate taxable income or claim higher refunds.


5. Significant Year-on-Year Income Variation

A drastic change in income compared to previous years—such as a sudden spike in salary, a sharp fall in profits, or a major swing in business turnover—can lead to scrutiny if not backed by genuine events. The department may want to verify the reasons behind such variations, especially if they affect the final tax liability.


6. CASS Selection (Computer-Assisted Scrutiny Selection)

Even if your return appears flawless, it may still be selected under CASS. This system uses algorithms to conduct risk-based profiling and also includes random sampling. Factors like geographic zone, sector of employment, or specific transaction codes can be used for automated selection. While being picked through CASS doesn’t imply wrongdoing, it does mean your return will undergo a formal review.


Types of Scrutiny Under Section 143(2): Limited vs Complete

The scrutiny process is categorized into two distinct types depending on the nature and complexity of the discrepancies found:

Type

Scope

Example Triggers

Limited Scrutiny

Targeted verification of one or two flagged issues

Claim of foreign tax credit, large donations

Complete Scrutiny

Holistic review of all aspects of the return and supporting documentation

Multiple discrepancies, unexplained wealth

The notice will specifically mention whether your case falls under limited or complete scrutiny. This distinction helps you prepare the right set of documents and explanations.


Impact of Section 143(2) Scrutiny on Your Tax Filing and Reporting

A scrutiny notice under Section 143(2) doesn’t automatically mean you've done something wrong—but it does mean your return is being examined more closely. When the notice arrives, the entire tax process takes on a new level of seriousness, especially if the return contains incomplete information or questionable entries. Here’s how scrutiny can affect your filing and overall reporting:


1. Document Burden Increases

Once under scrutiny, expect to back up every figure with hard evidence. The assessing officer may ask for:

  • Detailed bank account statements

  • Salary slips and Form 16 from employers

  • Proof of deductions under Sections 80C, 80D, 80G, etc.

  • Property sale or purchase documents

  • Investment proofs—like ELSS, PPF, ULIPs

  • Explanations for any large or unusual transactions

If you’ve claimed a deduction, declared a capital gain, or reported foreign income—be ready with documents. Filing without preserving relevant papers often leads to complications during scrutiny.


2. Refund Delays

For taxpayers expecting a refund, scrutiny can put a pause on the timeline. The Income Tax Department withholds processing refunds until the scrutiny process concludes and the assessing officer is satisfied with the veracity of the return. Even minor mismatches or missing documents can prolong this process by weeks—or months.


3. Reassessment Possibility

If the officer finds inconsistencies between your return and supporting evidence, your income may be reassessed. This reassessment can result in:

  • Additional taxable income being added

  • Disallowance of deductions or exemptions

  • Imposition of interest under Sections 234A/B/C

  • Penalties for underreporting or misreporting under Section 270A

Such outcomes often stem from incorrect or inflated claims, unreported income, or failing to reconcile figures with AIS/Form 26AS.


4. Legal Risks

Ignoring a Section 143(2) notice isn’t an option. Failure to respond within the given time frame can trigger:

  1. Best judgment assessment under Section 144, where the AO determines your liability without your input

  2. Monetary penalties for non-compliance

  3. In extreme cases, prosecution—especially if the underreporting appears intentional or fraudulent

The law treats non-response seriously, making timely and complete communication with the department non-negotiable.

Bottom Line: Section 143(2) scrutiny is not about catching errors—it’s about ensuring clarity, accuracy, and accountability. If your records are complete, your income is reported truthfully, and your claims are well-supported, the scrutiny becomes just another formality. With the right preparation—and support from platforms like TaxBuddy—there’s nothing to fear.

Bank Account Reporting and Interest Income: Common Triggers

Incorrect or incomplete bank-related disclosures continue to be a top reason taxpayers receive scrutiny notices under Section 143(2). These issues often arise from oversight, misreporting, or a lack of reconciliation with official records. Since banks report your financial transactions to the Income Tax Department through systems like Form 26AS and AIS (Annual Information Statement), any mismatch between their data and your ITR can raise red flags.


1. Interest Income Underreported

Interest earned from savings accounts, fixed deposits, and recurring deposits is taxable and must be reported under "Income from Other Sources." However, many taxpayers either forget to include this income or underreport it, assuming banks have already deducted TDS. While TDS might have been applied, the gross amount of interest must still be declared. When the declared interest in your ITR falls short of what’s shown in Form 26AS or AIS, it signals a possible discrepancy, prompting a scrutiny notice.


2. Non-Disclosure of Active Accounts

ITR forms require you to declare all active bank accounts held during the financial year, including those with minimal or zero balance. The only exception is for accounts marked as "dormant" (inactive for over two years). Failing to report even one active account—especially one with substantial credits—can appear as an attempt to conceal financial information. This non-disclosure may lead to questions about the source and nature of the transactions in that account.


3. Mismatch in Bank Details

While not directly a trigger for scrutiny, errors in account numbers or IFSC codes can lead to failed refund processing. In some cases, such mismatches can also generate system alerts when account information doesn’t align with pre-filled data from PAN-linked banking records. If the system detects recurring refund failures or inconsistencies, the case may be flagged for manual review under scrutiny.


4. Unexplained Credits or High-Value Deposits

The presence of unusual or large deposits, especially in cash, foreign remittances, or transfers not aligned with your declared income, draws immediate attention. For example, if your ITR shows an income of ₹8 lakh annually but your bank statement reflects ₹30 lakh in total credits from various sources, the tax officer may seek clarification. In such situations, you’ll be expected to submit proof of source—whether from loans, asset sales, or gifts—with documentary backing.


How TaxBuddy Helps Avoid These Mistakes

Platforms like TaxBuddy make this process smoother by fetching data directly from Form 26AS and AIS. It automatically reconciles the figures with your draft return and highlights any inconsistencies before filing. Whether it’s an underreported interest amount, missing account, or mismatched entry, TaxBuddy’s system helps correct these errors early. With real-time alerts and expert-assisted reviews, users are guided to disclose accurate and complete information—dramatically lowering the risk of receiving scrutiny notices under Section 143(2).


Responding to a Scrutiny Notice Under Section 143(2)

Receiving a notice under Section 143(2) may feel intimidating, but it’s simply a request for clarification—not an immediate penalty. The outcome of the scrutiny depends entirely on how promptly and accurately you respond. Here's a step-by-step breakdown of what needs to be done:


1. Understand the Nature of the Notice

Begin by carefully reading the notice. Check whether it mentions limited scrutiny—which focuses on one or two specific issues—or complete scrutiny, which requires a comprehensive explanation of all entries in your return. This distinction will determine the volume and type of documentation you need to prepare.


2. Check the Deadline for Response

Most notices allow a response window of 30 days from the date of issue. This is not a flexible timeline. Missing it can escalate the matter and lead to adverse outcomes. Always note the issuance date and submit your documents well before the final day to avoid last-minute technical glitches or upload errors on the portal.


3. Collect Supporting Documents

Organize your paperwork meticulously. The scrutiny process often demands:

  1. Bank account statements (for interest income and unexplained credits)

  2. Form 26AS and AIS reports (to reconcile TDS and other income sources)

  3. Salary slips or Form 16 (to support salary income and exemptions)

  4. Investment proofs (for deductions under Section 80C, 80D, etc.)

  5. Property documents (sale or purchase agreements, capital gains calculations)

  6. Loan statements (for home loan interest or business expense claims)

Each document should directly support a claim made in your return or explain any discrepancies noticed by the Assessing Officer.


4. Submit Response via e-Proceedings

Most scrutiny interactions now take place through the Income Tax Department’s e-Proceedings module on the official income tax portal. Log in, go to the "Pending Actions" tab, and access your notice. Use the Submit Response button to upload documents and write explanations. In rare cases where physical appearance is required, the notice will specifically mention the venue and time.


5. Maintain Clarity and Consistency

Each explanation should be brief but accurate, aligning with the documentary evidence you provide. Avoid contradictions, assumptions, or vague justifications. For example, if your return shows ₹2 lakh of interest income, and Form 26AS shows ₹2.4 lakh, clearly explain the difference—was part of it from a joint account? Was TDS not deducted on a portion? Clarity builds trust.


6. Seek Professional Guidance for Complex Cases

If you're unsure how to interpret the notice, lack some documents, or find the scrutiny extensive, consult a tax professional. Expert representation ensures your rights are protected and that no unintentional errors worsen the situation. Tax platforms like TaxBuddy offer expert-assisted plans that guide you through every step, from document collation to portal submissions.


7. Avoid Inaction at All Costs

One of the worst mistakes is ignoring the notice or responding half-heartedly. In such cases, the Assessing Officer is empowered to initiate a best judgment assessment—a process where they compute your income and tax liability based on their estimates, without considering your explanations. This can lead to inflated tax demands, penalties, and even prosecution in extreme cases.


How TaxBuddy Helps You Stay Scrutiny-Ready

TaxBuddy simplifies compliance by combining automation and expertise:

  1. Auto-verification of data from Form 26AS and AIS ensures reported income matches records

  2. Smart alerts flag potential red flags like high-value transactions or deduction mismatches before filing

  3. Expert-assisted plans help draft timely and accurate responses to scrutiny notices

  4. Document storage ensures all returns, declarations, and evidence are accessible when needed

By using TaxBuddy, you significantly reduce the chances of receiving a Section 143(2) notice—and if you do receive one, you’re already equipped to respond effectively.


Conclusion

Section 143(2) scrutiny is part of the income tax system’s checks and balances. It shouldn’t be feared if your returns are accurate, complete, and supported by documentation. Most cases are resolved with a proper response. With tools like TaxBuddy, taxpayers can confidently file returns, detect issues early, and handle scrutiny notices without stress. For anyone looking for assistance in tax filing, it's highly recommended to download the TaxBuddy mobile app for a simplified, secure, and hassle-free experience.


Frequently Asked Questions (FAQs)


Q1. Does TaxBuddy offer both self-filing and expert-assisted plans for ITR filing, or only expert-assisted options?

TaxBuddy provides flexible filing options. You can choose the self-filing route if you're confident in handling your return independently, or opt for expert-assisted plans where professionals guide you through the entire process—including responding to scrutiny notices, if any.


Q2. Which is the best site to file ITR?

Several platforms offer online ITR filing, but TaxBuddy stands out for its intelligent filing system, real-time mismatch alerts, and after-filing support. Its seamless user interface, combined with AI-driven checks, ensures your return is accurate and less likely to trigger a scrutiny notice.


Q3. Where to file an income tax return?

Income Tax Returns can be filed directly on the official portal (incometax.gov.in) or via trusted platforms like TaxBuddy, which simplify the process, reduce manual errors, and offer expert guidance for more complex cases.


Q4. What is the difference between summary and scrutiny assessment?

A summary assessment under Section 143(1) is automated and checks for mathematical errors or mismatches in tax credits. A scrutiny assessment under Section 143(2), however, is a detailed manual review conducted by an assessing officer to verify the authenticity of the claims made in the return.


Q5. Can I ignore a Section 143(2) notice if I believe my return is correct?

No. Even if you believe your return is accurate, failing to respond to a Section 143(2) notice can lead to serious consequences. The department may initiate a best judgment assessment, impose penalties, or, in severe cases, initiate prosecution.


Q6. How can I avoid receiving a scrutiny notice?

Ensure your ITR matches data from Form 26AS, AIS, and bank records. Avoid claiming unjustified deductions or exemptions. Disclose all bank accounts and high-value transactions. TaxBuddy’s pre-filing checks help identify and fix inconsistencies that commonly lead to scrutiny.


Q7. What documents should I keep ready for scrutiny?

Maintain updated records of:

  • Bank statements

  • Salary slips or Form 16

  • Form 26AS and AIS

  • Investment proofs (ELSS, LIC, PPF, etc.)

  • Property sale or purchase documents

  • Loan statements

  • Any other supporting papers for income, deductions, and exemptions claimed

Proper documentation streamlines your response if a scrutiny notice is issued.


Q8. Does using a tax filing app like TaxBuddy reduce the risk of scrutiny?

Yes. TaxBuddy's AI-backed filing engine detects potential red flags before submission. It alerts users to mismatches, missing disclosures, or unusual deductions, enabling you to file a clean return and reduce the likelihood of receiving a scrutiny notice.


Q9. How to report interest income from multiple bank accounts?

Aggregate all interest earned from savings, recurring, and fixed deposits across accounts and report it under “Income from Other Sources” in your ITR. Use Form 26AS and bank statements to ensure the reported amount matches the actual credits received.


Q10. Is it mandatory to report all bank accounts in the ITR?

Yes. All active bank accounts held during the financial year must be disclosed in the ITR, except those classified as dormant. Incomplete disclosure can raise compliance issues and trigger a Section 143(2) scrutiny notice.


Q11. What happens if incorrect bank account details are reported in the ITR?

Incorrect account numbers or IFSC codes can delay refunds or cause them to fail. More importantly, such errors may raise doubts about data accuracy and could result in scrutiny. Always verify account details before submitting your return.


Q12. How does a mismatch between bank interest and ITR affect scrutiny?

The Income Tax Department cross-verifies your return with Form 26AS and AIS. If your ITR shows less interest income than what’s reported by banks, it could trigger a Section 143(2) notice. Regularly reconciling your records before filing can help avoid this issue.


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